Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889047.1_cds_XP_016443711.1_38847
CDS Infomation

[gene=LOC107769050] [db_xref=GeneID:107769050] [protein=ruBisCO large subunit-binding protein subunit alpha-like] [protein_id=XP_016443711.1] [location=join(250451..250507,250685..250874,251512..251633,251794..252001,252099..252244,252417..252723,253093..253544,254286..254573)] [gbkey=CDS]
Sequence

ATGGCATCTGCAAATGCGATCTCCACTGCCTCTATCATATCCTCTTCATCTAAACAGGTG
GGTTTGAAGGGTAGAAGGGTGAACCAATTGCAGGGGCAGAAGTTCCACAATAACAAGGCT
TCAAAGAGTCGGTTAATAGTAAGGGCAAATGCTAAAGAAATCGCATATGACCAGAAATCA
AGAAGTGCCCTTCAGGCTGGTATTGATAAGCTCGTTGATGTTGTTGGTCTCACTCTTGGT
CCTAAGGGGAGGAATGTGGTTTTAGATGACTATGATACCCCGAAGGTGGTTAATGATGGA
GTCACGATTGCTCGAGCCATAGAGCTACCTGATGCTATGGAAAATGCAGGTGCCGCCCTT
ATCAGAGAGGTTGCAAGCCTAACAAATGATTCTGCTGGTGATGGGACAACAACTGCATCA
GTTCTTGCCAGGGAAATCATTAAGCGTGGTCTATTAAGTGTTACATCTGGTGCAAATCCA
GTGTCTTTGAAGAAGGGTATCGACAAAACTGTAAACATTTTGATTGAAATGCTAGAAAGA
AGGGCTAGGCCTGTTAAAGGTCGTGATGACATCAAAGCTATTGCTTCTATCTCTGCTGGA
AATGATGATGACATTGGAACCATGATTGCTGATGCAATTGATAAAGTTGGTCCTGATGGT
GTTCTAACAATCGAGTCATCCTCTTCCTTTGAAACAACTGTTCATGTTGAAGAGGGAATG
GAGATTGATAAGGGATATATCTCCCCACAATTCATGACCAACCAGGAGAAATTAATTGTA
GAATTTGAGAATGCTAGAGTGCTGGTTACAGATCAGGAGATTTCAGCAATCAAGGATATT
ATGCCCCTCTTGGAGAAGTCAACTGAATTACGAGCCCCTCTGCTCATTATAGCTGGAGAC
TTAACTGGAGAAGCTTTGGCTACTCTTGTTGTGAACAAGCTGCGAGGTGTACTGAATGTT
GCTGCCATCAGAGCACCTGGTTTTGGGCAAAGGAGGAAAGCTCTTCTCCAAGATATTGCC
ATTGTAACAGGAGCAGAGTACCAGGCTACTGAATTGGGTATGCTTGTTGAAAATACCCCA
GTTGAAGCACTAGGTTTTGCTAGAAAGGTGACCATCTCCAAGGACTCAACAACCATTCTT
GCTGATGATGCGTCAAAGGACGAGATACAGACTAGGATTTCTCAGCTTAAGAAGGAGTTG
GACATGACCGATTCAATATCTGACTCAGAAAAACTTGCTGAGAGAATTGCCAAGTTGTCT
GGAGGTGTTGCTGTCATAAAGGTTGGAGCTGCAACAGAAGCTGAGCTCGAGGACCGCAAG
CTTCGAATTGAGGATGCGAAACATGCAACTTTTGCTGCAATTGAAGAGGGAATTGTACCT
GGTGGTGGTGCTGCTTTGGTTCATCTATCAACTTATGTCCCTGCCATTAAGGACAATCTT
GAAGATCCAGATGAGAAGTTGGGGGCTGACATTGTGCAGAAGGCATTAGTAGCTCCGGCA
TCTTTGATAGCCCAAAATGCTGGGGTTGAAGGGGAAGTAGTTGTGGAGAAGATAAAGGCA
AGCAAATGGAAGATGGGTTACAATGCAATGACCGACAAGTATGAGAACTTAGTAGAAGCT
GGTGTCATTGATCCAGCCATGGTAACAAGATGTGCCTTGCAGAATGCAGCTTCAGTTGCA
GGAGTTGTACTCACTACACAAGCCATTGTCGTGGACAAGCACACGCCTAAAGCACCTGCA
TTTGCTCCTCCACAAGGACTTCCTATGTAA

Peptide Sequence

PEP ID

XP_016443711.1
PEP Infomation

PREDICTED: ruBisCO large subunit-binding protein subunit alpha-like [Nicotiana tabacum]
Sequence

MASANAISTASIISSSSKQVGLKGRRVNQLQGQKFHNNKASKSRLIVRANAKEIAYDQKS
RSALQAGIDKLVDVVGLTLGPKGRNVVLDDYDTPKVVNDGVTIARAIELPDAMENAGAAL
IREVASLTNDSAGDGTTTASVLAREIIKRGLLSVTSGANPVSLKKGIDKTVNILIEMLER
RARPVKGRDDIKAIASISAGNDDDIGTMIADAIDKVGPDGVLTIESSSSFETTVHVEEGM
EIDKGYISPQFMTNQEKLIVEFENARVLVTDQEISAIKDIMPLLEKSTELRAPLLIIAGD
LTGEALATLVVNKLRGVLNVAAIRAPGFGQRRKALLQDIAIVTGAEYQATELGMLVENTP
VEALGFARKVTISKDSTTILADDASKDEIQTRISQLKKELDMTDSISDSEKLAERIAKLS
GGVAVIKVGAATEAELEDRKLRIEDAKHATFAAIEEGIVPGGGAALVHLSTYVPAIKDNL
EDPDEKLGADIVQKALVAPASLIAQNAGVEGEVVVEKIKASKWKMGYNAMTDKYENLVEA
GVIDPAMVTRCALQNAASVAGVVLTTQAIVVDKHTPKAPAFAPPQGLPM

Transcript Sequence

Gene sequence data has not been registered.